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The percentage of trinucleotides was calculated for different size segments flanking the genes, on both 5′ and 3′ sides using a script written by us.
Using a script written by Jez and John-Henry Butterworth, Jagger and Grazer put together "Get On Up," an unconventional biography about Brown that jumps through the singer's life, from his troubled upbringing in Georgia to his incredible career as a performer to his numerous issues with the law.
95% confidence intervals estimated by bootstrapping over loci were computed using a script written in Matlab [35].
Sorting of sequence reads based on index sequences and the subsequent extraction of sequence tags from reads was conducted using a script written in Perl.
Experimental and sample data were then downloaded using a script written in R (http://www.r-project.org) which made use of the Bioconductor package GEOquery (http://www.bioconductor.org).
Reynolds distance matrixes obtained for the molecular and the allelic approaches were compared using a script written with the R statistical software (http://www.r-project.org/).org/
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We used a script written by Mr. Pierre Jonniaux and Dr. Takamasa Suzuki, with which individual genes of the reported mitogenomic sequences were automatically taken from the databases into a fasta file.
(Phase I: Patient 1, Practice 4) Receptionists were frequently responsible for taking calls from patients seeking results, and used a script written by the GP to provide further information.
A script written using the Experimental Run Time System (ERTS) software controlled the presentation and response registration.
For each population pair (105 combinations) and trait [six least correlated traits (r = 0.02 0.69); LVS, LEN LF, LEN ST, ST, PROP FL ST, INF], we calculated QST from variance components estimated using the 'lme' package and a script written for pairwise QST comparisons (available on request) in r (Version 2.12.1).
Putative miRNA binding sites in 3′-UTR sequences were predicted using a Perl script written to implement a "SeedMatch" algorithm incorporating rules similar to those of TargetScanS (Lewis et al. 2005).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com