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The high-throughput docking of up to 106 small molecules followed by scoring based on implicit-solvent force field can robustly identify micromolar binders using a rigid protein target.
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However due to rigid body displacements, an optimal superposition may not be obtained using a rigid body superposition method.
The allosteric binding site was detected when trying to dock the inhibitor onto the kinase using a rigid geometric protein−protein docking procedure, without any distance constraints.
Registrations were performed using Elastix software [ 18] using a rigid transformation model (translations and rotations).
We used the CHK2 protein conformation, including the conserved water molecule, from the co-crystal structure of compound 30 to dock the set of 50 ligands (Supplementary Table S1) using a rigid docking protocol.
The Hattler catheter solved this using a rigid fiber mat constructed around a central balloon [ 57].
using a rigid stainless steel cannula and maintained in a vertical position until spontaneous recovery.
Also Allen and Burian described trabeculotomy using a rigid probe with satisfactory results [ 18].
Height was measured to the nearest centimeter using a rigid stadiometer.
Height and weight were measured using a rigid stadiometer and scales DP-7100PWW, Ltd, Hyogo Ltd, Hyogo, Japan).
In both samples, standing height was measured to the nearest centimeter using a rigid stadiometer.
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