Sentence examples for using a relaxed clock from inspiring English sources

For the UK MSM clade we estimated an origin in 1992 (1988 1997) using a relaxed clock model, and 1990 1985 to 19944) using a strict clock model.

Giribet et al., [29, fig. 10], using a relaxed clock analysis for multiple genes and multiple fossil calibration points, estimated a divergence value for the common ancestor of Erebomaster plus Theromaster at over 100 Ma.

Approximate divergence times were estimated using a relaxed clock method [ 70] as implemented in BEAST 1.5.3 [ 71].

TMRCA estimates were obtained using a relaxed clock model with log-normally distributed and uncorrelated rates of substitution between branches.

Input files for BEAST were created with BEAUti v1.4.7 [ 54], using a relaxed clock model [ 55], with a Yule prior and the nucleotide substitution models proposed by MrModeltest version 2.2 [ 56], using the Akaike information criterion.

3) from analyses using a relaxed clock with lognormal and exponential settings, and inferred ancestral areas at internal nodes (RASP) and branches (DEC; relative probability of an area reported for branch leading to numbered node).

We used a relaxed clock model, drawing substitution rates from a lognormal distribution.

Because we used a relaxed clock, we do not assume that evolutionary rates are constant across all branches; rather the rates are drawn from a lognormal distribution.

We used a relaxed clock model implemented in Beast 1.4.7 [ 42- 44] to estimate divergence times between phylogenetic lineages based on the concatenated dataset of all genes.

To prevent the negative effects from heterogeneity of substitution rates and uncertainty of fossil data, we used a relaxed clock and Uncorrelated Lognormal (UCLN) model [ 96, 97].

Having previously rejected a strict clock model (results not shown), divergence times were estimated using a relaxed molecular clock with log-normal uncorrelated rates.