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The assembly is the execution of a developmental molecular program specified using a reaction graph abstraction that describes the kinetic pathways by which the DNA reactants self-assemble and disassemble.
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In addition, we use a reaction graph representation that is in some sense dual to the substance graphs every reaction is a vertex in this network and two reactions that have a substance in common is connected.
The program is depicted as a reaction graph using a nodal abstraction that concisely describes the kinetic pathways by which DNA reactants self-assemble and disassemble.
Let us assume that (G = (S, R, A)) is a reaction graph.
Now, we give an example to show how to get a reaction graph.
Calculation of the shortest path between two compounds using the reaction graph considers the two links that join two compounds to a reaction as a single link.
Connectivity relationships between reactions in a metabolic network as defined by stoichiometry can be modeled using a directed graph with vertices representing reactions and edges indicating a directional interaction between connected reactions.
Absorbance of the reaction mixture was determined at 520 nm and the free proline concentration estimated using a standard graph drawn from known concentrations of l-proline.
We could now compute the similarity between the representative graphs using a graph kernel.
We directly define our graph by using a bidirected graph.
The interaction was interpreted using a line graph.
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