Sentence examples for using a positional weight from inspiring English sources

Using a positional weight matrix, the RDRM was used to generate the initial profile and to scan the entire D. radiodurans genome.

Rescreening was performed within the observed conversion tracts as well as in 1,000 random genomic region of the same length using a positional weight matrix.

CGIs were scanned for presence of Sp1 factor binding sites using a positional weight matrix (PWM) constructed from experimental data from the TRANSFAC database.

Scores of the intron splice sites and splice sites of the flanking exons for retained and constitutively spliced introns were calculated using a positional weight matrix as described in Data and Methods.

sRNAscanner is a generic transcriptional signal-based computational method using a Positional Weight Matrix (PWM -based strategy for the discovery of intergenic sRNA transcriPWM -baseditstrategyin completely sequenced bacterial genomes.

We used a positional weight matrix (PWM) [ 52, 53] as a model.

Our previous works used a positional weight matrix to characterize the signal content and a discrete distribution to characterize the position [ 43].

Some researches solved the assembly line balancing problem using a ranked positional weight technique (Helgeson and Birnie 1961).

A positional weight matrix was generated using the ArcA-binding sites predicted in E. coli for which footprinting experiments are available reviewed in [ 36].

The typical representation of a TF-recognized DNA binding pattern is a positional weight matrix (PWM, or position specific frequency matrix, PSFM).

Therefore, one can compute a positional weight of a letter at a certain position by changing the consensus sequence at that position and measuring the change in d.