Sentence examples for using a phylogenetic method from inspiring English sources
In the present study the FMR of most Australian marsupial species was predicted for the first time using a phylogenetic method that was explicitly designed to handle incomplete data.
We therefore determined the extent of genetic exchange among Neisseria species, using a phylogenetic method to analyze 69 virulence genes shared by all 19 Neisseria genomes (Data Set S2).
Using a phylogenetic method combined with data from an Australian prisoner cohort, we showed that diversity in the virus genotype could partly explain diversity in the infection outcome.
Here, we present PlantOrDB, a genome-wide ortholog database that is developed using a phylogenetic method and contains over 1.5 million protein sequences from 35 land plants and 6 green algae.
Having observed putatively recombinant sequences in both the ESAG2 and ESAG5 families, we used a phylogenetic method to rigorously test each of the sequences from the four BES loci in the three trypanosome subspecies for evidence of recombination.
A determination of the environmental range of members of the Lachnospiraceae was undertaken using a phylogenetic assignment method.
The main alternative to supertree methods are combined analysis methods, also known as supermatrix or total evidence approaches; these methods concatenate the alignments on each marker to produce a large "combined dataset", which is then analyzed using a phylogenetic estimation method (e.g., maximum likelihood or maximum parsimony).
Besides the above selection, the other potential candidate CYP450 selected method using a phylogenetic analysis between the full-length CYP450s from our 454-EST datasets and other CYP450s from other plants which were associated with secondary metabolism biosynthesis was performed.
To assess whether phylogenetic evidence exists that is consistent with this notion, we estimated phylogenetic relationships among fungal tRNase Zs by using a Bayesian phylogenetic method.
For this, we used a phylogenetic clustering method, neighbor joining, in the PHYLIP package.
Using a classical phylogenetic method, a gene tree, representing the evolution of the gene family by local mutations, can then be constructed based on the similarity scores.
