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RouteSearch [40] maximizes atoms conserved throughout the pathway using a heuristic scoring function.
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PSI-BLAST computes and scores alignments using a heuristic approximation to the Smith Waterman algorithm (Smith and Waterman 1981) with affine gap costs (Gotoh 1982) providing uniform penalties for opening and extending a gap.
Similarity is determined using a heuristic that considers the total number of comparison genome bases contributing to hits as well as the scores of the hits.
We scored each of the 543 possible 4-node DAGs in a brute force approach without using a heuristic search algorithm.
We carry out the normalization using a heuristic way.
Parsimony analyses were conducted using a heuristic search strategy.
The initial exam was further improved using a heuristic.
One thousandbootstrap replicates were computed using a heuristic search with the optimal criterion set to "parsimony".
PAUP* was used to generate a maximum parsimony phylogeny using a heuristic search algorithm.
This is done using a heuristic search strategy starting from a randomly generated motif.
ME analyses were performed using a heuristic search with a distance optimality criterion [ 46].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com