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Using a genomic relationship matrix increased the accuracy of breeding values relative to using a pedigree relationship matrix.
The PCA was performed using a genomic relationship matrix [ 26] to define the covariance between animals.
Moreover, genomic prediction using a genomic relationship matrix that takes sex-linked inheritance for X-specific markers into account will probably perform better than using a genomic relationship matrix that does not distinguish between autosomal and X-specific markers.
Pseudo-heritability [ 21] was similarly estimated using a genomic relationship matrix [ 23], with REML estimates of variance components, as previously described and implemented in Python [ 22].
All animals were sampled at random and relationship statuses between animals of each population were confirmed using a genomic relationship matrix.
Predicting genomic breeding values using a genomic relationship matrix is an attractive approach to implement genomic selection as expected accuracies of GEBV can be readily derived.
Similar(47)
We used a genomic relationship matrix in a double hierarchical generalized linear model to estimate genome-wide breeding values and genetic parameters.
The GBLUP method uses a genomic relationship matrix computed using imputed or nonimputed marker information.
GBLUP uses a genomic relationship matrix (G) instead of the numerator relationship matrix (A).
A method equivalent to RR, i.e. GBLUP that uses a genomic relationship matrix [ 26], is applied here for comparison.
This GREML model used a genomic relationship matrix (G) and simulated phenotypes based on 3000, 300, 30 or 3 QTL underlying the simulated trait.
More suggestions(15)
using a similar relationship
using a nonlinear relationship
using a genomic shotgun
using a special relationship
using a genomic reference
using a genomic pull-down
using a contextual relationship
using a genomic array
using a single relationship
using a mathematical relationship
using a gametic relationship
using a complex relationship
using a quadratic relationship
using a personal relationship
using a genomic source
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