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However, since reusable values are desired, rather than fine tuning the scale parameter, distributions were inspected based on a constant using a diverse dataset.
The regression trees were trained using a diverse dataset of 350 mutations with experimental thermodynamic data derived from the ProTherm (69) and SKEMPI (70) databases and used in a blind test in a previous study (43).
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This dataset was generated from two barley genotypes, Morex and Golden Promise, using a diverse series of tissues and is available from Plant Expression Database (PLEXdb).
Using a comprehensive, geographically diverse dataset, we find that geno2pheno (FPR5) is the most accurate approach for the prediction of coreceptor tropism in HIV-1 subtype C viral sequences.
We developed the entire scoring function using a dataset of sequentially diverse set of 3988 protein chains with at most 25% pairwise sequence identity at least 2Å resolution, selected by the PISCES server [ 34].
Thus, the objective of this work was to test the effectiveness of EPO on intact field moist soil spectra and a dried-ground spectral library from highly weathered soils located in Brazil and to use this diverse dataset to assess the sensitivity of the EPO-PLS parameterization and performance to changes in the structure of the calibration spectral dataset.
Using a long-term dataset on a diverse taxon, butterflies, we test how fragmentation affects community composition and the long-term dynamics of species richness.
We developed a method for clustering potential binding sites using a curated dataset of structures for six therapeutically relevant proteins from diverse protein classes in the protein data bank.
The variability of the results shows the need to use several, diverse datasets for a full evaluation.
In the present work, we resolved to perform a comprehensive phylogenetic analysis and motif analysis using a much larger dataset (especially including much more diverse eubacterial lineages than previous work) to explore this issue.
To overcome the limitations of previous in silico studies, we use a taxonomically diverse eukaryotic dataset to investigate traditional cDNA-AFLP experiments sensu Bachem [ 11].
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