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We were able to validate our results by using a different array containing 1024 peptide sequences derived from motifs in human proteins that are known to be phosphorylated.
Using a different array system, SPAC3F10.09 was reported to be induced in meiosis [ 9], presumably also reflecting an erroneous detection of map3 transcripts transcribed from the opposite strand.
A replication in the outbred HS animals, using a different array platform and population, showed an additive effect of genotype on expression.
What we can say is that using a different array of tasks, Lewis and Freebairn (1992 , 1998 also found a deficit in oromotor skills in first-degree relatives of children with phonological deficits.
Therefore, this might represent the best approach in the long term, since it facilitates switching from one vendor to another, and allows using a different array depending on the clinical indication.
As an additional means of examining how robust the results from the UPSC-TC experiment were, we performed an OPLS analysis on the Pt-TC experiment, which compares different tissue type of Populus trichocarpa using a different array technology, to examine the degree of agreement between the two datasets.
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These authors used a different array platform than ours, which precludes precise quantitative comparisons.
After that, another hybrid source using a different battery array (eight cells) was investigated to further validate the control strategy and to show the flexibility and generality of the hybrid source design.
The differences in the populations studied may have contributed to the observed discrepancies, however, even when the same individuals were examined using a different approach (BAC array vs. SNPs) less than half (43%) of the CNVs were detected on both platforms [ 12].
Our findings suggest that this may be a difficult tissue to use, requiring replicate sampling and arrays, which may perform better using a different technology such as an array format or amplification method designed for heavily degraded template material.
We have also shown enrichment on differentially methylated imprinted sites in an independent HCC dataset (TCGA) using a different version of Illumina bead arrays.
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