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FT-BLAST also offers the possibility to identify bogus hits using a decoy database, allowing the user to report results for a pre-defined False Discovery Rate.
Using a decoy database, the false discovery rate was determined to be ≤1%.
The false discovery rate (FDR) was calculated by enabling the peptide sequence analysis using a decoy database.
After adjusting to 5% FDR using a decoy database, an overlap of 86% was observed (Fig. 4e).
The search results were filtered by a false discovery rate of 0.05 using a decoy database search.
A minimum peptide cut off score of 20 was set, corresponding to <3% global false discovery rate (FDR) using a decoy database search.
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Decoy database searching is based on the real data and uses a decoy database derived from this real database; as this maintains the same amino acid composition and the search space characteristics.
We next used a decoy database search strategy [40] (using the same search criteria as the real database search) to calculate p-values for peptide identifications as this allows us to assign the probability of a false identification based on the real data from the experiment itself [40], [63], [64].
We next used a decoy database search strategy [ 49] (using the same primary filter for the real database search) to calculate P values for peptide identifications as this allows us to assign the probability of a false identification based on the real data from the experiment itself [ 49- 52].
The false discovery rate was determined using a decoy randomized database.
Mr. Bremer sneaked out of Iraq, using a decoy plane.
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using a graph database
using a decoy target-decoy
using a custom database
using a user database
using a subscription database
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using a research database
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using a decoy decoy
using a reverse database
using a music database
using a hospitalization database
using a decoy strategy
using a reference database
using a training database
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