Sentence examples for using a correlation distance from inspiring English sources
Dendrograms were constructed using agglomerative hierarchical clustering of the class images, using a correlation distance metric and average linkage clustering.
The pvclust package (http://cran.r-project.org/web/packages/pvclust/) was using a correlation distance measure and average agglomeration method.
We use a correlation distance of 50 km for the smoothing.
Differentiation between pairs of populations was computed using FST and tested with GenAlEx, version 6.3 [ 49]. Isolation by distance (IBD) was tested on SSR data by computing Mantel tests in GenAlEx, version 6.3 [ 49] using a correlation of FST/ 1-FST) with geographic distance FST/ 1-FSTirs of populations.
We also performed hierarchical clustering using a Pearson correlation distance metric (Fig. S2, inset dendrogram), and demonstrated that sample similarity was strongly based on resection status.
To assess copy number profile agreement between the two platforms in a ploidy-independent manner, we carried out hierarchical clustering of the sample profiles using a Pearson correlation distance metric.
The resulting matrix was clustered using Cluster3.0 [ 60] using a Pearson Correlation distance metric and was visualized in R. RNA samples from triplicate biological replicates of MCF7 cells treated with scrambled siRNA or siZNF217 were extracted using the RNAeasy Kit (Qiagen).
Hierarchical clustering and principal components analysis using an uncentered correlation distance metric and average linkage clustering were performed in Cluster (cluster bb3.0, http://rana.lbl.gov/eisen/) with visualization in Treeview (treeview 1.60 programs, http://rana.lbl.gov/eisen/).lbl.gov/eisen/
In this stage, MAIT uses a peak correlation distance and a retention time window to find which peaks came from the same source metabolite based.
Dendrograms were generated in Gene Spring version 6.0 (Silicon Genetics) using hierarchical clustering, and similarity was measured using a distance correlation [ 50].
A gene tree heat map was built using Pearson correlation distance metric with an average linkage algorithm.
