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The tree using a concatenation of the best conserved ribosomal protein genes in the living world, constructed with each method, also reached the same topology.
First, a phylogeny using a concatenation of five slowly evolving protein sequences (Frr, NusA, PgK, RpmA, and RpsS) was reconstructed.
MTI information was warped to model space using a concatenation of the "MTI-to-DTI", "DTI-to-anatomy", and "anatomy-to-model" transformations.
We simulated data using a concatenation of Weibull distributions to flexibly emulate the data observed in a real study [ 10] of obese animals (control; X = 0) versus animals that were obese and then lost weight via CR (treatment; X = 1).
Bourlat et al. [ 37] grouped cephalochordates with vertebrates according to the traditional Euchordata hypothesis using a concatenation of the 13 protein coding genes under a site- and time-heterogeneous mixture model in Bayesian phylogenetic reconstructions.
This particular organization of the rRNA genes is consistent with the phylogenetic position of the seventh order of methanogens determined using a concatenation of ribosomal proteins [ 16] and constitutes a distinctive characteristic of Thermoplasmatales and related lineages.
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To create a phylogeny of the isolates, we used a concatenation of the 8 sequenced regions for each isolate.
The maximum likelihood analysis used a concatenation of the DNA sequence from the 7 MLST genes to ensure a broad sampling of the genome.
90 IMG/MER uses a concatenation of results obtained from both these programs, retaining the longest element prediction in case of overlap.
Mitochondrial alignment: we used a concatenation of 12 mitochondrial genes (atp6, atp8, cox1, cox2, cox3, cytochrome b, nad1, nad2, nad3, nad4, nad4L and nad5) totally 3591 sites from 17 mammals.
The species tree was build using a concatenation method.
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