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Using a compendium of cell-state-specific gene expression data, we identified genes that uniquely define cell states, including those thought to represent various developmental stages.
Using a compendium of microarray gene expression data from the M3D database [30], networks were constructed for the 27 genes contained in the ROS pathway as defined by the EcoCyc database [1] (Figure 2).
Using a compendium of microarray gene expression data obtained from Escherichia coli, we constructed a series of Bayesian network models for the reactive oxygen species (ROS) pathway as defined by EcoCyc.
Each activity was then assigned an energy expenditure value using a compendium of physical activity energy costs.
We calculated the metabolic equivalents (METs) for each activity, using a compendium of physical activity values [ 10].
A metabolic equivalent (MET) value was assigned to each activity by using a compendium of activity energy costs (20).
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Most opera companies today (including the Metropolitan) use a compendium of the versions that Mozart wrote for performances in 1787 in Prague and 1788 in Vienna.
To address the mechanism of action of CGs on JAK2 protein levels in an unbiased manner we used a compendium of mRNA signatures derived from cell lines exposed to 1309 compounds, including CGs [24].
In addition, we used a compendium of gene synonyms and aliases to improve recall.
We used a compendium of gene expression experiments in which various chromatin modifiers were deleted or mutated [ 13].
We used a compendium of breast cancer microarray studies curated for the meta-analysis of Haibe-Kains et al. (2012) and available as supplement to their article.
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