Sentence examples for using a bidirectional blast from inspiring English sources

These homologs were determined using a bidirectional BLAST search between the genomes of Cyanothece 51142 and the organism, using an e-value cut off of 10-30 and the requirement of mutual best hits.

In addition, the predicted protein sequences were compared to the Kyoto Encyclopedia of Genes and Genomes (KEGG) database [ 34] using a bidirectional BLAST under the threshold of 1e-5, which resulted in a total of 3076 KO (KEGG Orthology) numbers that corresponded to particular sequences.

To determine the boundaries of this cluster, all genes in this genomic region were compared with the genome of the closely related species Corynebacterium efficiens [ 12], using a bidirectional best BLAST hit method [ 13]. a by sequence similarity b identified by BLASTP similarity search.

For this purpose, we used 24 known human PTS1 proteins (ACOT4, ACOX1, ACOX2, ACOX3, AGXT, AMACR, BAAT, CRAT, DAO, EHHADH, GNPAT, HAO1, HAO2, HSD17B4, IDE, MLYCD, PRDX5, ACOT8, CROT, PECI, ECH1, LONP2, PECR, and PIPOX) and performed orthology searches on metazoan protein and EST sequences using a bidirectional best BLAST hit strategy.

Peter Lofgren et al. [30] introduced a modification of their original algorithm [16] using a bidirectional perspective.

To compare perioperative outcomes during laparoscopic myomectomy using a bidirectional barbed suture vs conventional smooth suture.

The MM3B measures volume using a bidirectional digital turbine.

The educators' beliefs about self-monitoring were assessed using a bidirectional linear scale [ 36].

For example, using a bidirectional tracer such as WGA-HRP is not appropriate.

Recordings were digitally filtered using a bidirectional Igor Digital Signal Processing filter (Oren et al. 2006).

ECT was administered using a bidirectional constant current, brief pulse device.