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Following second strand amplification, 3.1 μg of purified cDNA was obtained using a QIAquick Mini Elute kit (Mississauga, On, Canada).
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Finally, the DNA was purified using a QiaQuick PCR purification kit (Qiagen).
The cDNA fragments were purified using a QIAquick PCR extraction kit.
For use as quantitative standards, the products of the Mycoplasma FRET-PCR on vaginal swabs were gel purified using a QIAquick Gel Extraction Kit (Qiagen, Valencia, CA, USA).
The amplified library was purified using a QIAquick PCR Purification Kit, quantified on the Agilent 2100 Bioanalyzer and finally sequenced on an Illumina Hiseq 2000 instrument.
DNA fragments between 400 600 bp were then selected on a 2% agarose gel and purified using a QIAquick Gel Extraction Kit.
PCR products were analyzed on agarose gel, purified using a Qiaquick PCR purification kit (Qiagen, Valencia, CA, USA), and quantitated prior to DNA sequencing.
The PCR conditions were as described elsewhere (Miyahara et al. 2013), and amplicons were purified using a QIAquick PCR Purification Kit (Qiagen K. K., Tokyo, Japan).
The expected size band (680 bp) was excised from the gel and eluted using a Qiaquick Gel Extraction kit from Qiagen.
Samples were purified using a QIAquick gel extraction kit.
Products of the secondary PCR reaction were purified using a QIAquick purification column (QIAGEN).
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