Sentence examples for uses the same alignment from inspiring English sources

The SNP tree uses the same alignment as in Figure 1, but is constructed from the SNPs that can be assigned to each branch.

Significant portions have been upgraded to a divided highway; however, most of the upgrades used the same alignment as the old two lane road.

However, in the final version, Route 31 ran via Hamburg, using the same alignment as a planned spur of pre-1927 Route 8 from Lafayette to North Church.

The potential HGT acquisition time was estimated by BEAST v1.6.1 using the same alignment.

These reads were instead extracted and used for de novo assembly with gsAssembler, using the same alignment paramaters.

In addition to the NJ-tree a quartet-puzzling tree was constructed with Treepuzzle 5.2 [ 118] using the same alignment.

We aimed to use the same alignment methods and similar methods for defining these different cis-regulatory regions.

Protein parsimony trees were made using the same alignment with the Phylogenetic Analysis Using Parsimony software package (PAUP* version 4.0) [ 41].

Reads that failed to map to either the TAIR10 or Ler genomes were mapped against the Cvi pseudogenome using the same alignment parameters (-n 1 -l 50).

Similarly, new sequencing primers were constructed using the same alignment (sequences of PCR primers and sequencing primers for rbcL are listed in Additional file 2).

Models of the molecular evolution of the entire MIKCC-type group from Arabidopsis, poplar, and peach were statistically tested using the same alignment and the inferred best fit phylogenetic tree estimated using maximum likelihood.