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It uses BLAST scores to measure relation of proteins and detect complex orthologous relationships between species.
An RBH approach uses BLAST to compare a query sequence against another genome [85], [87].
FastBLAST then uses BLAST to compare each seed sequence to all of these potential members of the ad hoc family.
This program uses BLAST [14] to compare the complete set of protein sequences from one genome with that of another, and identifies the reciprocal best hits.
FastBLAST then uses BLAST to compare the non-redundant subset of unassigned regions (the seeds) to the merged non-redundant members of known families.
The B2G program uses BLAST to find homologous sequences to input sequences and extracts GO terms (Gene Ontology) to each obtained hit using existing annotations.
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Using Blast, gamers can save in two ways.
The resulting sequences were analyzed and aligned using Blast Local Alignment Tool (BLAST) program at the National Centre for Biotechnology Information (NCBI).
The sequence similarity of nucleotide and protein sequences was compared using BLAST (http://www.ncbi.nlm.gov/blast).nlm.gov/blast
Genes were identified using BLAST [47].
Briefly, related sequences were determined using BLAST results from databases.
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