It was found that the surrounded set had a significantly lower folding tendency using a sequence based measure, than the non-surrounded set.
We also used a sequence based approach, called CNV-seq [ 60], in which the sequencing depth of coverage of our bull was compared with the sequencing depth of coverage of another bull sequenced in another study [ 46].
We used a sequencing based ASE assay [9] to correlate the pre-mRNA level of IFIH1 with the common haplotypes marked by the T1D associated nsSNP Thr946Ala.
Although, currently no mapping populations are available for the barley variety used here, a sequence based strategy for assigning Ds insertions in Golden Promise to linkage map coordinates on the existing Oregon Wolfe Barley map has been reported [ 13].
To improve the annotation of GTs in prokaryotes, we developed an analysis flow that uses a sequence-based strategy to predict GTs and a network-based approach [ 14] to identify links between these predicted GTs and other genes/proteins.
Because experimental data on the binding registers is unavailable, the classifier is trained on a balanced set of 9-mer binders and non-binders predicted using a sequence-based prediction method [26].
SIFT uses a sequence homology based approach to classify the substitutions in amino acids.
The model uses a design sequence based on either direct use of code provisions or use of safe load tables.
After eligibility had been confirmed and consent was given, patients were randomized 1 1 to the DE or NDE group, by using an allocation sequence based on a block size of four, generated by a computer random-number generator.
Nevertheless, we have used a very sensitive HMM-HMM comparison method for annotating human domains but searched for the node of origin of those domains using a sequence-profile based method.
T cell antigenic targets in patients with resolved infection are detailed in table 2. Our previous work using a viral sequenced based approach in association with HLA type predicted little cross-reactivity between CD8 T cells that target genotypes-1 and -3.
