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This work aims to be a guide to future users for the analysis of the OMEGA data.
Due to the small sample of users, for the analysis of the results, the users were grouped in students and professionals since the participants who declared profession other than students can be considered as professionals.
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AffylmGUI allows a graphical user interface for the analysis of Affymetrix microarray GeneChips using the LIMMA package (linear modes for microarray data) in R (Smyth 2005).
AffylmGUI allows a graphical user interface for the analysis of Affymetrix microarray GeneChips using the limma package (Smyth 2005) in R. A contrast of treated control samples was used to generate p-values and M-value [log2 (treated/control)].
Malin provides a feature-rich graphical user interface for the analysis tasks. Figure 1 gives an example of an alignment panel, where, in order to build an intron table, the user selects the conservation criteria (such as the minimum number of gapless positions next to an intron site) for discerning homologous sites in a set of multiple alignments.
The platform combines a rapid thermal cycler, an integrated time-resolved fluorescence measurement unit, and user-friendly software for the analysis of results.
The LightCycler technique provides a 30-min PCR system with continuous fluorescent detection, analysis of the melting points of the products and user-friendly software for the analysis of the unknown samples.
NetworkAnalyzer is a versatile and user-friendly tool for the analysis of biological and other networks.
mzMatch ISO provides an efficient and user-friendly output for the analysis and compact visualization of isotope-labelled metabolomics datasets without the need for specialist bioinformatics skills, allowing rapid, precise and meaningful biological interpretation.
Molecular phylogenetic reconstructions have become increasingly popular over the last few decades mainly as a result of easy and cheap access to gene, genome and other large-scale sequencing methods and to the development of user-friendly platforms for the analysis of sequence data.
By doing this, the potential genes of interest would be highlighted to the users for further analysis.
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