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A job is divided into stages according to tasks׳ execution sequence and Data Shuffling is used to represent interactions between stages.
The symbolic notations of Table 1 are used to represent interactions among layers, instead of arrows like in Fig. 3.
These extensions can be used to represent interactions in Systems of Systems or other types of concurrent and integrated systems.They are exemplified by modeling two versions of a Skype-like system.
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For instance, different types of interactions can be mapped to edge colors (e.g. protein protein to blue, protein DNA to green), and the edge width can be used to represent interaction weight.
The nature and complexity of these interactions varied from pathway to pathway, and for simplicity a line connecting two KEGG pathways was used to represent these interactions.
The fast multipole method (FMM) has been shown to have a reduced computational dependence on the size of finest-level groups of elements when the elements are positioned on a regular grid and FFT convolution is used to represent neighboring interactions.
Non-determinism can, however, be used to represent unknown interactions.
The arcs of the graph are used to represent the interactions between components.
The interconnectedness information was manually extracted from the KEGG pathways, and for simplicity a line connecting two KEGG pathways was used to represent these interactions.
This model adopts a combination of reversible jump Markov chain Monte Carlo (RJMCMC) and dynamic Bayesian networks (DBN), in which RJMCMC is used for the identification of change time points and the resulting networks, and DBN is used to represent causal interactions among genes.
Each interacting query domain instance pair is scored according to the similarity of the interaction residues in the interaction interfaces, and the best query instance score is used to represent the interaction strength of the predicted PPI (how likely the two proteins in the PPI are interacting each with other).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com