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To investigate the effect of overlapping reads, the "merge overlapping pairs" module in the CLC Genomics workbench was used to overlap the paired-end reads [ 26].
For the evaluation, the GPS x y position was used to overlap the SLAM-constructed map with the MMS map, as shown in Fig. 18c.
The maximum fill-factor is achieved when the two-layer vertical stack is used to overlap the non-sensitive areas of one layer with the sensitive areas of the other one.
11 The Pymol program was used to overlap and compare the predicted FABP2 model with rat FABP2 structure.
First, the CYP3A4 Cα atoms were used to overlap the structures of the coordinate sets in the five 10 ns segments with the X-ray structure.
For segmentation of mPS-PI images, the EMPILER and SEGMENTATION scripts of mars_alt v1 were used; zviewer and zfuse (mars_alt v1) were used to overlap segmented images with EdU images and to mark selected cells.
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Perl script was used to filter overlapped ORF which has 80% overlap on the same strand in a contig with another longer ORF.
For overlapping variants between GWAS and EXOME, variants from EXOME were used to remove overlapping variants from GWAS.
To remove any overlap from repeat elements, the Galaxy Database Merge tool was used to concatenate overlapping repeat regions into single intervals.
Reciprocal T-CSSLs and K-CSSLs (CSSLs with Koshihikari genetic background) on chromosome 5 were used to detect overlapping QTL regions.
A zoom of the outlined region in panel M is used to illustrate overlapping Ezrin and RII staining in the membrane (Figure 2; panels P R).
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