Sentence examples for used to estimate phylogenetic from inspiring English sources

MrBayes v3.2.624 and BEAST v.1.8.225 were used to estimate phylogenetic relationships.

Bayesian inference (BI) was used to estimate phylogenetic positions of the Philippine endemic Canthium species.

Lastly, protein-coding sequences from 61 genes are used to estimate phylogenetic relationships of cotton with 25 other angiosperms.

Maximum Parsimony (PAUP* vb80) [ 49], Bayesian Inference (MrBayes v3.1.2) [ 50] and Maximum Likelihood (RaxML v7.0.4) [ 51] were used to estimate phylogenetic relationships.

These alignments were combined with the previously constructed eukaryotic alignments and used to estimate phylogenetic trees with PhyML 3.0 (see phylogenetic analysis) (Guindon et al. 2010).

Bayesian inference, implemented in MrBayes 3.2 [ 30], was used to estimate phylogenetic relationships among species of Cheirolophus based on individual analyses of the concatenate ITS + ETS (nrDNA) dataset and the concatenate four-plastid marker (cpDNA) dataset (each with 60 sequences: 57 Cheirolophus samples plus three outgroup taxa).

Multiple approaches were used to estimate the phylogenetic relationships among the observed haplotypes.

A maximum likelihood approach is used to estimate a phylogenetic tree for predicting the most likely structure for input sequences.

Default settings of RAxML version 0.7.4 (17 ) were used to estimate the phylogenetic trees on the basis of all the SNPs called from the genome as explained above.

These models were used to estimate the phylogenetic relationships between all populations of C. ornatum based on the mitochondrial cytb gene and the S7 and RAG1 nuclear genes.

These models were then used to estimate a Bayesian phylogenetic tree using the MrBayes program [42] launched from TOPALi v2.5.