Sentence examples for used the hypergeometric test from inspiring English sources

We used the hypergeometric test to identify those domains/motifs most likely to signal a protein-protein interaction involving domains with DA-SNPs.

We used the hypergeometric test to test for a significant overlap between the 117 diet-related genes and the PS gene lists, as described in the previous section.

We used the hypergeometric test to decide whether the overlap between the 117 diet-related genes and each of the 5'PS gene lists was significantly larger than expected, given the overlap between human and chimpanzee 5'PS genes and the three control sets defined above (see the Materials and Methods section "DNA sequence divergence").

For functional ontology analyses, we used the hypergeometric test through the GeneAnswers package [ 41].

We used the hypergeometric test to test the significance of the overlap between each signature and gene set.

We used the hypergeometric test to determine the significant enrichment of each miRNA set for the predicted regulatory miRNAs for the given genes, as we previously described [ 9].

We tested for overlap of modules across tissues on a pairwise basis using the hypergeometric test with a Bonferroni multiple-testing correction (α < 0.05).

Motif enrichment on these co-expressed gene was determined using the hypergeometric test with false discovery rate correction.

We performed a virus target enrichment of the 185 genes using the hypergeometric test [26].

Statistically significant over represented biological processes were determined using the hypergeometric test.

Enrichment analyses were performed using the hypergeometric test, with the entire CNS or phastCons list as a reference set.