Sentence examples for used the hypergeometric distribution from inspiring English sources

For example, [44] used the hypergeometric distribution for finding the expected link weights for bipartite networks and measured the global p-value.

We used the hypergeometric distribution to evaluate the probability (p-value) of randomly observing the enrichment or depletion for each GOSlim term [43].

We used the hypergeometric distribution to calculate p-values reflecting to which degree proteins annotated to a particular GO class were over-represented in the descriptor group.

For determination of the significance of overlap, we used the hypergeometric distribution with the following parameters: population size  = 46 (total orthologs proteins on human and mouse array), sample size  = 22 (mouse SASP), successes in population  = 20 (human SASP; see Fig. S1C and our previous report [15]), successes in sample  = 14 (qualitative overlap between the mouse and human SASPs).

We first used the hypergeometric distribution to determine whether these sites clustered within hypervariable regions.

We then used the hypergeometric distribution to classify each gene group as significantly induced or repressed across the biological types (p value < 0.05).

Fisher's exact test reports the exact p value under a null hypothesis of independent categories using the hypergeometric distribution.

The GO categories and KEGG pathway enrichment analysis of DEGs was performed using the hypergeometric distribution test compared to the whole-transcriptome background.

Enrichment significance for ATAC-seq and/or Atrx ChIP-seq associated genes relative to differentially expressed transcripts was determined using the hypergeometric distribution.

We compute this value in Equation 1, for 1≤v i ≤n≤v, using the Hypergeometric distribution.

Table 11 Producer sampling plans Open image in new window Source: ISO 2859-1 (1999) (Table 2, level II) risk revised using the hypergeometric distribution.