Sentence examples for used the exon array from inspiring English sources

For 438 transcript clusters overexpressed in liver relative to muscle, we used the exon array data to calculate the average gene expression fold change in three liver samples over three muscle samples.

Subsequently, we used the Exon Array probeset annotation and retained only the genes where the Exon Array meta-probeset coordinates contained both the Illumina and U133 probesets.

To support a specific link between genes that are coexpressed with Mgst3 and Alzheimer's disease we used the exon array data from GeneNetwork, as this is specific to the hippocampus.

The filtering steps and parameters described in this paragraph come from the Affymetrix technical note for the identification of ASE using the exon array [58].

Furthermore, we present a detailed catalogue of SNP-containing probesets (exon-level) and transcript clusters (gene-level), which can be considered in evaluating findings using the exon array as well as benefit the design of follow-up experiments and data re-analysis.

This event was also detectable using the exon array data.

RT-PCR of AdCa samples confirmed the differential splicing pattern measured using the exon array in four cases.

The ability to investigate splicing on a genome-wide scale using the exon array is an exciting prospect.

In Figure 4, we use the example of ELAVL1 to illustrate the advantages of using the Exon Array for profiling individual isoforms.

We have also investigated the heritability of splicing and compared it to heritability of transcript level expression using the exon array data.

150 ng of total RNA was processed using the Exon array target labelling kit (Affymetrix, CA, USA) according to manufacturer's instructions for small sample labelling but without the use of the RiboMinus step.