Sentence examples for used normalization from inspiring English sources

A different issue, however, is the underlying assumption made by the most widely used normalization methods to date, such as Median and Quantile normalization34 for microarrays, or RPKM (Reads Per Kilobase per Million mapped reads)4, TMM (Trimmed Mean of M-values)35, and DESeq36 normalization for RNA-Seq, which posit that all or most genes are not differentially expressed25,37,38,39,40.

Some of the commonly used normalization techniques and a brief description of each are given below.

The most commonly used normalization is to ensure that the largest component of the current iterate is equal to one.

The most commonly used normalization algorithms to derive the more appropriate set of RGs are NormFinder (Andersen et al. 2004), geNorm (Vandesompele et al. 2002) and BestKeeper (Pfaffl et al. 2004).

Although the integration value for axial analysis originally was normalized, this initially was not done for the angular measures for methodological reasons as well as the way the measures were used; normalization becomes important primarily when the measures of different systems are compared which has not been the focus of most research using angular analysis.

were used, normalization to control cells treated with the inhibitor alone was carried out to account for any toxicity caused by the inhibitor itself.

RRegrs is applied using normalization and filtering options.

Gupta et al. [66] preprocess the signal using normalization and low pass filtering.

Thus, we were able to use normalization methods designed for regular expression arrays.

The array data were analyzed together using normalization and pre-processing described in the Methods.

A) We use normalization for important reasons.