Sentence examples for used for gene selection from inspiring English sources

Information gain attribute evaluator, relief attribute evaluator and correlation-based feature selection (CFS) methods are used for gene selection.

Microarray data, although widely used for gene selection, measures only mRNA abundance, which does not always reflect the ultimate gene phenotype, since it does not account for post-transcriptional effects.

Seven decision tree methods (SimpleCart, BFTree, FT, J48, LADTree, LMT and REPTree) were used for gene selection to avoid the biases and overcome limitations of each single algorithm [22], [23].

After Affymetrix MAS 5.0 processing and normalization, a discriminant criterion derived from fold filters used for gene selection [37] was used to identify genes whose expression varied across the experimental conditions.

Statistical methods for identification of differentially expressed genes are widely used for gene selection.

In [ 7], the Fisher criterion score is used for gene selection.

A grid of t values are evaluated for each total sample size n. 2. For each t above, calculate the optimal significance level cutoff α to use for gene selection [ 10]. 3. Using the optimal α levels to select genes from pooled variance t-tests, develop compound covariate predictors (CCP) [ 11] for each training set.

Microarray data have been used for gene signature selection to predict clinical outcomes.

PCR amplification with sequence specific primers flanking the 51 bp insertion in the genomic sequence of Tex14 gene can be used for gene assisted selection against the SA defect in the Yorkshire population.

Details are provided in Table  1 and in Additional file 1. Dataset A was initially used for gene pre-selection.

In addition, post hoc mining of the expression dataset showed that another SNP (rs10242920 - ELMO1) association that was consistent with the effect reported in the CGEMS dataset was also actually associated with altered expression in carriers, albeit with less significance (P = 0.005) than originally used for gene and SNP selection.