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Appropriate search terms were used for each database.
Below are the search terms used for each database.
Appendix 1 details all search terms used for each database.
Due to minor differences in search options, slightly different search strategies were used for each database.
Refer online supplementary appendix 1 'Search terms' for specific detail of search used for each database.
A cut-off E-value of 1E-4 was used for each database.
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Respective default search parameters were used for each of the database search methods except that for each method the allowed number of miscleavages was set to 3 and a minimum of 10 reported peptides per query was requested.
Two databases were used for each screening, a screening database of active compounds and a screening database of decoys.
Please cite which version was used for each of these databases.
The data model used for each of the databases follows the class model shown in Figure 2.
If there were conflicting data, we prioritized peer-reviewed published literature followed by the main database used for each event.
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