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NCBI SRA toolkit was used for data format exchanging [ 81].
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The ROD is used for data and event formatting and for configuration and control of the overall read-out electronics.
Like the BED format, the BigBed format is used for data tables with a varying number of fields.
The JSON format was ubiquitously used for data storage and exchange.
ASN.1 is an International Standards Organization (ISO) data representation format used for data storage by the U.S. National Center for Biotechnology Information (NCBI).
Open source and platform-independent SAIC software is implemented using C++, together with R scripts for data formatting and Perl scripts for user interfacing, and it is easy to install and efficient to use.
Finally, Format catalogues the commonly used data formats used by bioinformatics tools and data.
For data import and export MzJava implements readers and writers for commonly used data formats.
In addition, using an integer data format allows for much simpler functional units.
We use a common data format (CDF) for experiment description and data storage that is device independent and machine readable.
One may retrieve functional genomics data from Genomedata archives much more quickly than the text-based formats commonly used for this data.
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