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This analysis used a random starting tree (one round of taxon addition) and the rapid hill-climbing algorithm (i.e., option -f d in RAxML).
For GARLI, we used a random starting tree and default settings for the components of the genetic algorithm.
41 The second used a random starting point and alternating distribution of red or green pills; the manufacturer held the code until the study was completed.
The analysis used a random starting tree and the rapid hill-climbing algorithm (i.e., option -f d in RAxML) and the WAG model of amino acid substitution were used.
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From the center, using a random starting position, 32 radii are drawn every 11.25 degrees (systematic random sampling).
Forty-six addresses were then systematically selected using a random starting point within each cluster.
Two independent analyses were run using a random starting tree with three heated chains and one cold chain over 400,000 generations, with sampling every 100 generations.
In the Solexa simulations, we used a random start site distribution with a 25 bp read length average.
Most SOMs are developed using a random starting point, although there are modifications that allow an initial map that reduces the number of iterations by basing it on the pattern of the samples, e.g, as obtained via PCA.
Households were then systematically sampled using a random starting point and sampling interval of n = 3.
Following a sort by area characteristics and region, 400 PSUs were systematically selected using a random starting point.
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