Sentence examples for used a hypergeometric test from inspiring English sources

We used a hypergeometric test to identify gene sets from the MSigDB [19] that are over-represented in the molecular paths detected by the EMPath method.

We used a hypergeometric test to compare each class to the reference background of genes.

We used a hypergeometric test and the Benjamini and Hochberg False Discovery rate (FDR) correction with 0.05 level of significance.

We used a hypergeometric test to determine the probability that the observed distribution of such regions among genes of interest was different to the distribution among all genes.

We used a hypergeometric test to compare the overlap found in the background and DMR/VMR list to determine the significance of DNase I hypersensitivity enrichment.

For enrichment we used a hypergeometric test and multiple testing corrections based on Q-values to keep the results comparable between the different databases.

DEGs upregulated in FOS+ DG neurons were assessed for functional enrichment through DAVID bioinformatics using a hypergeometric test.

Both analyses use a hypergeometric test for a p-value computation.

The statistical significances for the interactor overlap among disease pairs were calculated using a hypergeometric test.

Gene ontology analysis was carried out using publicly available on-line statistical package (FUNC, http://func.eva.mpg.de/) using a hypergeometric test.

GO analysis on differentially expressed genes was performed using a hypergeometric test, and corrected for multiple testing using the Benjamini-Hochberg FDR method.