Sentence examples for use the same alignment from inspiring English sources

We aimed to use the same alignment methods and similar methods for defining these different cis-regulatory regions.

Finally, to use the same alignment of the data against the model simulation as in previous studies [ 15, 16], we shifted the time axis using the transformation t← t+828.56.

However, we have previously demonstrated that MAQ is inadequate for the analysis of pooled DNA samples [ 9], and wanted to use the same alignment tool for both the individual and pooled sample to minimize differences in variant calling due to variable alignments.

Significant portions have been upgraded to a divided highway; however, most of the upgrades used the same alignment as the old two lane road.

However, in the final version, Route 31 ran via Hamburg, using the same alignment as a planned spur of pre-1927 Route 8 from Lafayette to North Church.

The potential HGT acquisition time was estimated by BEAST v1.6.1 using the same alignment.

These reads were instead extracted and used for de novo assembly with gsAssembler, using the same alignment paramaters.

In addition to the NJ-tree a quartet-puzzling tree was constructed with Treepuzzle 5.2 [ 118] using the same alignment.

Protein parsimony trees were made using the same alignment with the Phylogenetic Analysis Using Parsimony software package (PAUP* version 4.0) [ 41].

The SNP tree uses the same alignment as in Figure 1, but is constructed from the SNPs that can be assigned to each branch.

Reads that failed to map to either the TAIR10 or Ler genomes were mapped against the Cvi pseudogenome using the same alignment parameters (-n 1 -l 50).