Sentence examples for use the phylogenetic tree from inspiring English sources

Assuming that between closer related species less rearrangements have taken place, we use the phylogenetic tree distance to weight the match information.

We use the phylogenetic tree of the 856 OTUs from the throat microbiome dataset and divide them into 20 clusters (Fig. 1H).

We use the phylogenetic trees (topology and branch lengths) given in [ 9] to derive the pairwise weights, and use the motif lengths provided.

As suggested, we have therefore removed MDS from our manuscript (including the figure), and now directly use the phylogenetic trees of each gene segment to discuss our findings.

Using the phylogenetic tree, Njage and Buys (2015) reported the genetic similarity between commensal and pathogenic E. coli strains from lettuce and irrigation water, even at a distance of 246 km apart.

We used the phylogenetic tree from PFAM for the LysR substrate domain (PF03466) to examine the evolutionary relationships between the LTTRs used in this study.

We used the phylogenetic tree structure (topology) inferred from 62 complete mt AA sequences which was reconstructed via a multidimensional vector space (MVS) method [2].

For the reference tree we used the phylogenetic tree of microbial species provided by the ARB-SILVA Living Tree Project [ 42].

The hypothetical ancestral genome was determined using the phylogenetic tree information for this set of six species [ 35].

Therefore, we also reestimated the divergence times of the Pinaceous subfamilies and genera by using the phylogenetic tree obtained in the present study and three reliable fossil records.

For that purpose, the raw structural reliabilities (i, j) and (i) are calculated by the constrained folding with Pfold using the phylogenetic tree deduced from the concatenated alignment.