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We use the genotypes of 184 partially inbred mice from the CC lines (Aylor et al. 2011).
For this analysis we could use the genotypes of all 3,973 unique subjects subjects, regardless of case-control and matching status.
We use the genotypes of 1504 individuals in the control group of WTCCC dataset, and perform an association analysis, assuming that the lactase-persistence phenotype is completely determined by SNP rs4988243 in chromosome 2.
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We applied HH to identify the known locus using the genotypes of 10 affected subjects of a family with a rare dominant eye disease SCCD.
HH accurately detected the ∼1 Mb genomic interval encompassing the causative gene UBIAD1 using the genotypes of only four affected subjects.
The HH approach was validated using the genotypes of patients from a family affected with a rare autosomal dominant disease Schnyder crystalline corneal dystrophy.
We simulated phenotypes using the genotypes of the NFBC data.
G was constructed using the genotypes of all 278 lines.
We used the genotypes of these inferred parental individuals to obtain estimates of genetic variability.
Current routine genomic evaluation of cattle populations is performed using the genotypes of ~54 000 SNP.
The GRM was constructed using the genotypes of all 10 191 animals in the combined datasets according to [ 28].
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