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Here, we use the default setting that allows negative gene gene correlation and does not use rank.
Depending on the software used, it is possible to use the default setting or to choose an expert setting for the CART modelling.
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Then, the functional linkage could be generated using the default setting.
These three sets were input into GeneMANIA (http://www.genemania.org) [ 13, 14] individually using the default setting.
Only two out of ten free available DICOM de-identification toolkits had a success rate of de-identification higher than 90%% using the default setting.
Scanned images were analyzed by using the default setting of GCOS 1.4.
The number of transformation matrices is adjusted automatically based on the amount of adaptation data using the default setting of HTK.
In response to earlier complaints, parents were later allowed to toggle off the app's search capabilities and set their own private passcode, instead of using the default setting, which spells out numbers as words for parents to enter.
Using the default setting, the one hundred genes with the highest correlation to the seed profile were returned (Table S1).
Using the default setting in BEST, we identified 57 target genes (Supplementary Table S4) and 139 experimental conditions as foreground.
The clustering heatmap was generated by dChip using the default setting, i.e, the "1-correlation" distance metric and the centroid linkage method.
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