Sentence examples for use the crystal structures from inspiring English sources

In this paper, we use the crystal structures of the nucleosome core particle, B-DNA and the globular domain of H5 linker histone to build the first all-atom model of compact chromatin fibers.

To build the atomic structure of the dimer of DnaB, we again use the crystal structure for G40P helicase, where all six subunits of G40P are present.

This protocol was based on a combined analysis of the deduced amino acid sequences and structural homology models obtained using the crystal structures of related enzymes as templates.

Therefore, we examined the interaction with NAD+, using the crystal structures of two ALDHs complexed with NAD+, whose Km values were 0.047 mM and 0.0019 mM respectively (PDB: 1A4Z, 1BXS 47,48.

Here, a series of monocationic compounds was designed on the basis of docking experiments using the crystal structures of 1a,b bound to nNOS.

They used the crystal structures and the sequence of the corresponding protein from the SARS virus to suggest a model of the new virus's protein.

Additionally, using the crystal structures of both domains, we modeled the catalytic reaction core in complex with DNA and a quinolone.

We next used the crystal structures of TCL1A and IκB_ank to perform SAXS-guided rigid body docking with the program SASREF [13].

CryoEM maps of neutralizing Fab fragments complexed with VLPs have been interpreted using the crystal structures of the Fab fragments and the VLP structure.

Structural modeling was performed in Visual Molecular Dynamics (VMD; Humphrey et al. 1996) using the crystal structures available in the Protein Data Bank.

Apart from sensitive profile-based searches, using the crystal structures of bacterial pathogenic PTLs, we have also carried out search for proteins which can potentially adopt PTL fold.