Here, we demonstrate this feature of ngs.plot by use of multiple ChIP-seq samples, including several histone marks (H3K4me3, H3K27ac, and H3K27me3) and transcription factors (Suz12, Oct4, and Tet1), and an RNA-seq sample, from mouse ESCs (mESCs) [see Additional file 1: Table S1].
To compare the results of multiple ChIP experiments, parse2wig uses a modified RPKM (reads per kilobase of exon model per million mapped reads) normalization (Mortazavi et al. 2008), that is also used in ChIPseeqer (Giannopoulou & Elemento 2011).
Combination of multiple ChIP-Seq experiments can help to determine transcriptional networks [ 15].
Over time, these network analyses will be enriched by the use of broader data sets (for multiple doses and times of treatment) and from the use of multiple data streams e.g., ChIP-seq and metabolomics.
The use of multiple immunogens.
Through the use of DSP chips and multiple microphones, hearing aids now offer the possibility of performing signal-to-noise enhancement.
Even when off-chip regulators are used, if there are multiple chips, cores on different chips can be operating at different frequencies.
Ultimately, the technology could be used to transmit trillions of bits of data per second between multiple chips within a single computer.
Together, they supply the more than 1.1 billion cellphones, many of which use multiple ARM chips.
If more than one chip is being used, follow the ACIS Exposure Map (Multiple Chips) and Exposure-corrected Image thread.
