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The deposited data sets may contain genomes and gene annotations that differ in their degree of precision and resolution owing to the use of different sequencing methods and annotations.
All five studies (see Table 1) compared cost data for the use of different sequencing platforms.
The use of different sequencing platforms in this study was instrumental in confirming significant and consistent changes in transcriptional activity.
This is despite the use of different sequencing and genotyping technologies for the construction of the maps.
One possible explanation for these different 16S rRNA sequencing results may be the use of different sequencing approaches, such as using cloned DNA versus genomic DNA as template.
Such robustness facilitates the use of different sequencing platforms in actual surveillance and investigations to achieve repeatable results in subtype differentiation.
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One of the strengths of FunnyBase is the use of different sequence databases (SwissProt [ 40], NCBI UniGene [ 36], and NCBI non-redundant NR [ 41]) to provide separate annotations.
Furthermore, the lack standardization of ADC values (mainly due to the use of different sequences and different gradient-shape design by the manufacturers) still suggests caution in the routine application of the technique.
As for the third tree species, V. vinifera, the difference is approximately 14% (1728 in PlnTFDB versus 1492 in TreeTFDB), which may be due to the use of different sequence versions for TF identification.
So the matter of TE-CDS exaptation remains unsettled, and in this report we have tried to address the issue from two perspectives: i-with respect to the ascertainment biases that arise from the use of different sequence similarity search methods and ii-in terms of the protein coding potential revealed by the probabilistic analysis of exonized TE nucleotide sequences.
Given a set of genomes, MetaSim can collect samples from these genomes to create a metagenome dataset using simulations of different sequencing techniques, for example, Roche's 454-Pyrosequenching (GS-FLX generation).
More suggestions(15)
use of different window
use of different lentivirus
use of different baseline
use of different peptide
use of viral sequencing
use of identical sequencing
use of new sequencing
use of different path
use of multiple sequencing
use of different summer
use of expensive sequencing
use of multilocus sequencing
use of parallel sequencing
use of different vocal
use of conventional sequencing
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