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After the user (step 6) inputs the number of CPUs (cores) to use for the calculation, Aptaligner (step 7) performs the alignments using a Markov model.
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See Grades for the values used for the calculation.
The melt H2O contents measured by FT-IR reflectance spectroscopy were used for the calculation.
The pairwise sequence divergence at aligned fourfold degenerate sites was used for the calculation.
Extended Data Fig. 2 Areas used for the calculation of the albedo variation in Fig. 1d.
The code used for the calculation of diversity indices is available at: http://villeger.sebastien.free.fr/Rscripts.html.html
When evaluated on a binned grid, the lower-edges of the bins are used for the calculation.
The earthquakes area used for the calculation.
" I am not sure if the same method used for the calculation of HadCUT4.
This result is used for the calculation of (29).
Angles used for the calculation of each cost function.
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