It was found that the surrounded set had a significantly lower folding tendency using a sequence based measure, than the non-surrounded set.
We also used a sequence based approach, called CNV-seq [ 60], in which the sequencing depth of coverage of our bull was compared with the sequencing depth of coverage of another bull sequenced in another study [ 46].
We used a sequencing based ASE assay [9] to correlate the pre-mRNA level of IFIH1 with the common haplotypes marked by the T1D associated nsSNP Thr946Ala.
Although, currently no mapping populations are available for the barley variety used here, a sequence based strategy for assigning Ds insertions in Golden Promise to linkage map coordinates on the existing Oregon Wolfe Barley map has been reported [ 13].
We use a sequence-based evolutionary algorithm and evolve the network based on two physically motivated fitness functions related to information transmission.
However, as a sequence assembly of the barley genome has just been published [ 21, 22], we also wanted to use a sequence-based genetic marker methodology that would in principle allow us to link directly to the genome sequence assemblies and physical map, ultimately as a shortcut to facilitate the identification of the Ari-e gene.
We chose to use a sequence-based alignment method because P s t a r t and P e n d are likely related proteins and will have similar sequences.
Because experimental data on the binding registers is unavailable, the classifier is trained on a balanced set of 9-mer binders and non-binders predicted using a sequence-based prediction method [26].
The model uses a design sequence based on either direct use of code provisions or use of safe load tables.
SIFT uses a sequence homology based approach to classify the substitutions in amino acids.
After eligibility had been confirmed and consent was given, patients were randomized 1 1 to the DE or NDE group, by using an allocation sequence based on a block size of four, generated by a computer random-number generator.
