This study demonstrates the simplicity with which one can construct a set of nucleic acid computing units using a new computational protocol.
It supports efficient execution of incremental and iterative computations by using a new computational model called timely dataflow that differs from MapReduce model.
To identify surface proteins that distinguish functional CLPs from B-cell progenitors, we used a new computational method of Mining Developmentally Regulated Genes (MiDReG).
Then, this year, in perhaps the most disturbing exercise, Yaniv Erlich, a genetics researcher at the Whitehead Institute, used a new computational tool he had invented to identify by name five people from their DNA, which he had randomly selected from a research database containing the genes of one thousand people.
They then used a new computational code to fit the shape of the SED and to derive the most likely value of the AGN contribution, as well to measure the star formation rate, the dust properties, and numerous other physical parameters.
Now a team of scientists at the University of California, Irvine, has used a new computational approach--the "linkage disequilibrium decay" test--to search for signs of selection over the entire human genome.
In addition, the resulting sequence was analyzed using a new computational approach to obtain a consensus sequence and several metrics of diversity.
The integrated data have been used to identify brain, liver and testis-selective genes using a new computational method based on both microarray hybridization intensities and detection calls.
In this report, we combined SNP discovery with SNP genotyping using a new computational pipeline, making the process both more efficient and cost-effective.
While there are several methods for validating PPI data, including those based on interacting domains, gene co-expression profiles, or gene ontology (GO) annotation semantic distances [ 42, 45- 49], we assessed the quality of the new HAPPI database by comparing the extent of overlap between PPIs and MetaGene pairs, using a new computational approach described earlier in the Method section.
