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We then calculated the number of bin-pairs to be filtered out by setting upstream thresholds increased from the downstream threshold by 1 as the step each time, and finally removed the bin-pairs whose CI frequencies are larger than 153 in hESC and 133 in IMR90, respectively (assuming they are outlier in each cell line).
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Region boundaries were then defined by the LRT locations crossing this threshold upstream and downstream of the peak LRT.
In particular, for the L-shaped channel case, it is demonstrated that beyond a second field threshold an upstream vortex appears in addition to the downstream one.
However, the optimal transmit power of each flow based on the OTPU algorithm mainly depends upon the maximum transmit power threshold of upstream SU.
The top 10% of conserved regions (minimum conservation of 70%) within 5000 bp upstream and matrix match threshold 95% was scanned for TFBSs in the JASPAR database (127) using a position weight matrices algorithm.
In our experiments, we set the minimum quorum threshold to 7% within the upstream regions and the maximum support threshold to 30% in the ORF regions.
The results indicate that the flux threshold is related to the topographic lifting of the moist air, with lower threshold in the upstream high altitude stations in the watershed.
This was to be expected, as in order to fit three different concentration levels the model had to contain mainly slow switches (low n) and only few Boolean-like switches (n → ∞). Figure 4E shows the distribution of the threshold parameters k upstream of the measured species.
This revealed 29 filtered (threshold radius of 10) upstream regulators.
Table 11 lists the 12 newly found occurrences in the entire yeast genome (upstream regions) using a hamming distance threshold of 5.
Fish responded farther upstream at a lower spatial velocity gradient threshold (ca. 0.2 cm s−1 cm−1) in the presence of both mechanosensory and visual cues when light.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com