Sentence examples for updating identifiers from inspiring English sources

We applied the best suited application to updating identifiers in Recon 2, the latest reconstruction of human metabolism.

A name search is the best option available for updating identifiers for metabolites that are only annotated with a name.

To speed up the process of updating identifiers, we took advantage of the extensive metabolite annotations that are available in HMDB [14, 15].

In addition to updating identifier types that were already present in Recon 2, we added identifiers for the LIPID MAPS Structure Database (LMSD) [32] which were previously missing.

A random sample of 100 automatically updated identifiers were also checked manually.

All three applications enabled partially automatic updating of metabolite identifiers, but significant manual effort was still required to fully update identifiers.

In the original algorithm the identifiers of the alpha atoms of a center atom are used to calculate an updated identifier for the center atom.

This iterative procedure implicitly grows a circular substructure around the center atom because with an increasing number of iterations the updated identifier of a center atom contains information from further and further away.

This protocol uses the hash of its identifier as a response to a reader query to maintain scalability at the server, and the back-end server sends a message using the updated identifier to the tag after getting the tag response.

It is therefore not conducive to automatic updating of identifiers.

More generally, we hope that our results will guide developers of reconstruction tools in implementing strategies for automatically updating metabolite identifiers in metabolic network reconstructions.