Sentence examples for updated trees from inspiring English sources

> -wrap-foot> We are currently operating an instance of our framework as part of the iPlant collaborative (http://www.iplantcollaborative.org/) to maintain and make available perpetually updated trees for the Viridiplantae clade (using the rbcL, matK and atpB genes).

For transformers (things that take an AST, change it and return a updated tree) Falafel and Recast were mentioned.

The newly updated tree provides more specific grouping, most likely due to the better current annotation of the GH43 genes, as biochemical data have been reported for all proposed five phylogenetic groups after the previous tree was published.

Age also added to the predictive capacity of the updated tree (nodes 13 and 14).

18 publications which described additional (sub- haplogroups were consub- haplogroups an updated tree.

The updated tree (Fig.  4) from this study is largely consistent with the previously published tree [ 18].

DOLLOP was rerun on this updated tree to reconstruct the final gene family configurations of the ancestral species.

These three biomarkers consistently contribute to the upper level decision rules of both the initially derived tree and the subsequent updated tree.

Figure  4 shows a simplified view (see Additional files 5, 6, 7 and 8 for complete views of the MSA and tree, respectively) of this updated tree.

ELA2 and LCN2 contributed to predictive capacity in the initially derived tree, but not in the subsequent updated tree, which instead included GZMB, MMP8, and age.

In contrast, in the updated tree, nodes in clade B have more reliable ML scores, with the lowest ML score being 91 (Fig.  4).