Sentence examples for units of reads from inspiring English sources

Once all reads were mapped, ERANGE reported gene expression in units of reads per kilobase of exon and per million tags sequenced (RPKM).

mRNA and footprint read density were calculated in units of reads per kilobase million (RPKM) to normalize for gene length and total reads per sequencing run.

The following metrics are based on coverage: the number of reads that cover a given genomic position (in units of reads per base).

Mean read density values for exons, introns, and intergenic regions were computed in units of reads per kilobase of exon/intron/intergenic per million mapped reads [ 23].

FP and mRNA densities were calculated in units of reads per kilobase per million (RPKM) in order to normalize for gene length and total number of reads per sequencing run.

Using these reliable reads, we compute pseudogene expression levels in units of Reads per Kilobase of Uniquely mappable transcript per Million reads (RPKUM).

Both read depth and read density are presented in units of read depth per million bases acquired to obtain higher scale values.

For each transcript, by tabulating the number of reads mapped and by normalizing with sample size and transcript length, we can calculate the expression level of transcripts and genes in the unit of reads per kilo base per million mapped reads (RPKM).

The immunoprecipitated RNA DNA hybrids map heterogeneously within this repeat unit, with accumulation of reads at the known exons of the rDNA gene, and others in the intergenic spacer (IGS) region.

To provide a solution to this need, a wireless multichannel telemetry unit capable of reading strain is required.

After taxonomic classification of phylogenetic marker genes from metagenomic sequences in the previous step, for each taxonomic unit, we have a set of reads assigned to each phylogenetic marker gene.