The expected number of substitutions of each type on the reference branch at this position was then added to the relevant cell of the contingency table.
First, we estimated error rates of each sequencing methods by comparing the base types of the reference sequence and that of the mapped reads.
Data from seven cell types of the myeloid lineage: hematopoietic stem cells (HSC), myeloblasts, leukemic stem cells (LSC), acute myeloid leukemia (AML), granulocytes, monoblasts and monocytes were compared against the 44 tissue types of the reference data types.
This is because the BEAST approach just provides a shell where, e.g. the type of indicators, the reference crops or the spatial filter rules could be exchanged according to the specific targets of the application.
After the 0-min normalization, profiles would not be affected by the type of the common references used (e.g., G1, G2 or asynchronous cells).
In other types of resequencing the reference is used as a scaffold for the assembly of short sequence reads.
In practice, the parameters of the flight controller of the quadrotors are commonly tuned experimentally with respect to a certain type of reference, such as the step reference and the unit-ramp reference.
For the hexagon maze, there was a main effect of trial type of the percentage of reference memory errors (F 2,14) = 26.868, p < 0.001).
This list contains atom numbers as well as atom types of the matched reference and target molecule atoms that were recognized as similar by LiSiCA.
