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Each cell line contains two data replicates.
A minimum correlation of 0.7 was used as a threshold to group profiles in the same cluster, where the value of 0.7 was obtained by considering the average distance between the two data replicates.
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Table 1 shows results from the analysis of the two mixed densities as well as those from 50,000 or 500,000 single density datasets using the same five data replicates.
The pink and purple circles in (C ) correspond to the hits annotated in Figure 1D, which shows the average of four data replicates; features that are not circled disappear after averaging.
This error is of the same magnitude as the RMS difference among the three field data replicates.
Ten data set replicates were each generated from base populations of 150 unrelated individuals subjected to random mating for 6000 generations.
Partial ROC tests (P < 0.05) using two data subsets with 1000 replicates.
All the data reported in this study are averaged replicates of two data points.
For all five data sets 1,000 bootstrap replicates were analyzed using PhyML.
The overlap of enriched-interacting regions between the two replicate data is ~33%, lower than enzyme-based method.
This process generated two replicate data points, expressed as PCR product ng, which were used for subsequent elaborations.
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