These sequences were compared against sequences of all known non-LTR elements using BLASTX to identify clones containing inserts truly corresponding to retrotransposable elements.
This confirmed again the accuracy of our method as only 1 out of total 165 tested papers (so 0.6% of the tested papers) did not have any author with an affiliation truly corresponding to the searched country.
The screening of multidimensional BAC pools with highly parallel SNP assays has been established, however, for libraries encompassing several genome equivalents considerable additional work has to be invested to identify among the putative BACs revealed in the screen those that are truly corresponding to the assay sequences.
To test whether they were truly derived from corresponding homoeologous chromosomes (i.e., chromosomes D10, D12, A12, A12, and D05), BACs 66B19, 70L23, 78J02, 38P15, and 84A20 were directly FISHed with their corresponding homoeologous chromosome-specific BACs, 78O17, 10G17, 43C02, 43C02, and 50D03 [ 21].
Owing to the small number of truly specific ESTs corresponding to MAL1_28s, the expression level of this gene in the parasite population is obviously much lower than the level rRNA gene expression from typical Chr5 and Chr7 A-type loci (Table 6).
We also considered additional measures, including false positive rate (FPR), true positive rate (TPR), and mean squared error (MSE) for the coefficients corresponding to truly null and truly associated predictors, to help evaluate the performances of competing statistical methods as displayed in Additional file 2: Table S6.
And just as a path through a mountain is made passable not just by removing the stone but by supporting the mountain from crumbling back in on itself, we know that no barrier will ever truly be removed until a corresponding structure, system or policy has positively taken its place.
However, even in this case, the real de-synchronization capabilities of RBA are not fully understood, given that as implemented in Stirmark, RBA consists of three modules with only one corresponding to a truly local geometric transformation [1].
For genes that are truly associated with disease, the corresponding p-values are expected to deviate from this sloping line.
To assess whether the signals observed with the phosphospecific antisera truly reflected phosphorylation of the corresponding residues, recombinant eEF2K produced by E. coli was treated with alkaline phosphatase for various times prior to analysis by Western blot.
Of the 498 markers in common across all 6 maps, in only 5 cases did markers map to a truly incongruous location on the corresponding linkage groups in alternative populations, which could be explained by mapping paralogous loci in different populations.
