trimming quality

USAGE SUMMARY

The phrase "trimming quality" is not commonly used in written English and may be unclear without context.
It could be used in contexts related to improving or adjusting the quality of something, such as a product or service. Example: "The team is focused on trimming quality to ensure that our final product meets the highest standards."

Science

News & Media

Human-verified examples from authoritative sources

Exact Expressions

7 human-written examples

We used FASTX-Toolkit to perform trimming, quality filtering, and duplication removal [ 37].

BMC Genomics

After trimming (quality, adapters, and poly (A) sequences) and duplicate removal, 7.2 18.9 million reads per sample were obtained.

Genome Biology and Evolution

We obtained 2,757,258 reads following adaptor trimming, quality (0.05), and length filtering (50 bp cutoff), using the software package CLC Genomics Workbench 4.5.1.

BMC Genomics

After adaptor trimming, quality assessment and removal of rRNA, 309,281 high quality ESTs were assembled into 41,918 contigs and 3,719 singletons (Table  1).

BMC Genomics

Read trimming, quality filtering, mapping, and conversion to per-gene counts was performed as described previously [ 27] with one modification: reads mapping to the same starting coordinate in the reference and aligning with 100% identity along the full length of the shorter read were discarded as potential PCR duplicates.

BMC Genomics

The resulting reads were mapped to the baboon genome (Panu2.0) using the efficient short-read aligner bwa 0.5.9 (Li and Durbin, 2009), with a seed length of 25 bases, a maximum edit distance of two mismatches in the seed, a read trimming quality score threshold of 20, and the default maximum edit distance (4% after trimming).

eLife

Human-verified similar examples from authoritative sources

Similar Expressions

53 human-written examples

Single pass sequences were vector trimmed, quality clipped and masked by Genesis Biotechnology.

BMC Genomics

Chromatograms of nearly full-length 16S rRNA gene sequences were assembled, trimmed, quality-checked, and chimeric sequences removed as previously described [18].

Plosone

Quality filtering and trimming for quality left 38.5 million paired-end reads and 6.7 million single-end reads.

Genetics

Elimination of poor-quality end reads from pyrosequencing raw data was done by quality trimming based on quality scores.

BioMed Research International

The quality screen consisted of trimming low-quality sequence, based on PHRED scores, using a custom algorithm.

BMC Plant Biology

Expert writing Tips

Best practice

When using "trimming quality" in scientific writing, clearly define the parameters and metrics used to assess quality before and after trimming.

Common error

Avoid using "trimming quality" in contexts where simple improvement or enhancement is meant. The phrase is more appropriate when specifically referring to removing parts to improve overall quality, rather than a general enhancement.

Linguistic Context

The phrase "trimming quality" functions primarily as a noun phrase describing the act of improving something by removing its unwanted parts. Ludwig AI shows its usage in various scientific contexts.

Expression frequency: Uncommon

Frequent in

Science

70%

News & Media

20%

Formal & Business

10%

Less common in

Academia

0%

Encyclopedias

0%

Wiki

0%

Ludwig's WRAP-UP

In summary, "trimming quality" is a phrase primarily used in technical and scientific domains to describe the process of enhancing something by removing elements considered to be of low quality. According to Ludwig AI, it is grammatically acceptable. While not incorrect, the phrase is specialized and might not be suitable for general contexts where simpler terms like "improving quality" or "enhancing quality" would be more appropriate. Its usage is most frequent in scientific publications, highlighting its formal and technical nature.

More alternative expressions

Phrases that express similar concepts, ordered by semantic similarity:

quality adjustment

Focuses on the act of adjusting the quality level.

quality refinement

Emphasizes improving quality through careful adjustments.

enhancing quality

Highlights the improvement aspect of the process.

improving quality

A more general term for making quality better.

optimizing quality

Suggests fine-tuning quality for the best possible outcome.

quality enhancement

Similar to enhancing quality, but focuses on the outcome.

fine-tuning quality

Implies making small, precise adjustments to quality.

quality modification

A broader term encompassing any change to quality.

quality control

Focuses on maintaining a certain standard of quality.

quality correction

Highlights fixing defects or issues to improve quality.

FAQs

How is "trimming quality" used in scientific research?

In scientific research, "trimming quality" typically refers to the process of removing low-quality data points or sequences from a dataset to improve the accuracy and reliability of subsequent analyses. This is commonly done in genomics and other data-intensive fields.

What does it mean to "trim quality" in sequencing data?

In the context of sequencing data, to "trim quality" means to remove sections of reads (DNA or RNA sequences) that fall below a certain quality threshold. This ensures that only high-confidence bases are used for downstream analysis, reducing errors.

Are there alternatives to "trimming quality" that convey a similar meaning?

Yes, you can use alternatives like "quality adjustment", "quality refinement", or "enhancing quality" depending on the context. However, "trimming quality" specifically implies a removal process.

What tools are commonly used for "trimming quality" in genomic data?

Several tools are available for "trimming quality" in genomic data, including Trimmomatic, FASTX-Toolkit, and Cutadapt. These tools allow users to set quality thresholds and remove bases or reads that do not meet these criteria.